{"id":834,"date":"2016-08-26T08:38:31","date_gmt":"2016-08-26T08:08:31","guid":{"rendered":"http:\/\/jakobssonlab.iob.uu.se\/?page_id=834"},"modified":"2025-02-10T13:29:57","modified_gmt":"2025-02-10T12:29:57","slug":"popsicle","status":"publish","type":"page","link":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/software\/popsicle\/","title":{"rendered":"POPSICLE"},"content":{"rendered":"\n<h1 class=\"wp-block-heading is-style-underlined-heading\"><a href=\"https:\/\/jakobssonlab.iob.uu.se\/index.php\/software\/popsicle\/\">POPSICLE<\/a><\/h1>\n\n\n\n<h3 class=\"wp-block-heading\">Population Size Coalescent-time-based Estimator<\/h3>\n\n\n\n<p>POPSICLE infers population size changes in the past by means of analyzing the distribution of coalescent times. The program is introduced in <a href=\"http:\/\/www.genetics.org\/content\/early\/2016\/09\/15\/genetics.115.185058\" target=\"_blank\" rel=\"noopener\">Gattepaille et al. (2016)<\/a> and is <a href=\"https:\/\/jakobssonlab.iob.uu.se\/software_Jakobssonlab\/Popsicle.zip\">available here<\/a> as a .zip file. The folder\u00a0contains the program and additional files such as example data. In addition, R should be installed on your system and the POPSICLE function can be found in popsicle.R.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>POPSICLE Population Size Coalescent-time-based Estimator POPSICLE infers population size changes in the past by means of analyzing the distribution of [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":2155,"parent":16,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-no-title","meta":{"footnotes":""},"class_list":["post-834","page","type-page","status-publish","has-post-thumbnail","hentry"],"_links":{"self":[{"href":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/wp-json\/wp\/v2\/pages\/834","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/wp-json\/wp\/v2\/comments?post=834"}],"version-history":[{"count":2,"href":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/wp-json\/wp\/v2\/pages\/834\/revisions"}],"predecessor-version":[{"id":2694,"href":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/wp-json\/wp\/v2\/pages\/834\/revisions\/2694"}],"up":[{"embeddable":true,"href":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/wp-json\/wp\/v2\/pages\/16"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/wp-json\/wp\/v2\/media\/2155"}],"wp:attachment":[{"href":"https:\/\/jakobssonlab.iob.uu.se\/index.php\/wp-json\/wp\/v2\/media?parent=834"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}